Table Of Contents
Latest update [menu]
Version 1.1.00 updated.
Description [menu]
Educational project / draft for real-time E.coli chemotaxis simulator. Currently in development. This release represents most recent milestone build.
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Git repository source available at [email protected]:/opt/git/expand.git
RSA key for repository available on Freedcamp project management site.
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If you would like access to the source, and contribute to development please contact me at the provided email address.
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Version 1.1.00:
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Features of simulator - designed and coded by Dr. Nikita Vladimirov.
1) Simulation of cells swimming in 2D with realistic run and tumble times, and with effect of rotational diffusion.
2) Simultaneous running of one up to a large number of cells local on your tablet.
3) Model correctly reproduces the high sensitivity of the chemotactic pathway (FRET experiments).
4) Multiple flagellar motors are simulated explicitly, and their number affect run and tumble times.
5) Gradient of attractant can be chosen from 8 pre-defined shapes, or defined by user.
6) Composition of receptor cluster (Tar and Tsr receptors) can be defined by user.
7) Protein levels (CheA, CheR, CheB, CheY) can be altered to simulate mutants.
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New Features
1) Plot is now an actual animation of path over time.
2) Each cells is now delineated by a unique color.
3) Random seed functions have been implemented on program and model start to ensure unique results each run.
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Future Directions
1) Migrate model computations and video rendering to cloud
2) Plot to zoomable and spinnable object.
3) Add cell animations to plots representing cell structures, and signaling events.
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BUG Fixes
1) Fixed resetting model so that multiple analyses could be run in one instance
How to install EcoliSim APK for Android [menu]
Download EcoliSim APK file (net.bounceme.blik.ecolisim_3_993830.apk) from SameAPK.com, then follow these steps:
Update Phone Settings
- Go to your phone Settings page
- Tap Security or Applications (varies with device)
- Check the Unknown Sources box
- Confirm with OK
Go to Downloads
- Open Downloads on your device by going to My Files or Files
- Tap the APK file you downloaded (net.bounceme.blik.ecolisim_3_993830.apk)
- Tap Install when prompted, the APK file you downloaded will be installed on your device.
How to install EcoliSim APK on Windows 7/8/10 or MAC PC? [menu]
Download EcoliSim APK file(net.bounceme.blik.ecolisim_3_993830.apk) from SameAPK.com to your PC (ex: /Users/xxx/Downloads/(net.bounceme.blik.ecolisim_3_993830.apk)), then follow these steps:
Using Emulator:
- Download And Install one Emulator Softwares (Ex: Bluestacks, GenyMotion, NoxPlayer)
- Simple install APK on PC by drag and drop file net.bounceme.blik.ecolisim_3_993830.apk on Emulator screen
EcoliSim APK Pros & Cons [menu]
Pros
- This app is safe, it's not require high risk permissions
- Compatible with 32 bit device (most Emulator using 32bit arch CPU)
- Compatible with 64-bit device (some android device and current Bluestacks)
Cons
Everything is good.
